Information for 13-CGGTTCGA (Motif 10)


Reverse Opposite:

p-value:1e-28
log p-value:-6.534e+01
Information Content per bp:1.904
Number of Target Sequences with motif281.0
Percentage of Target Sequences with motif6.29%
Number of Background Sequences with motif615.3
Percentage of Background Sequences with motif3.03%
Average Position of motif in Targets359.6 +/- 291.1bp
Average Position of motif in Background281.9 +/- 199.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

OPI1/Literature(Harbison)/Yeast

Match Rank:1
Score:0.92
Offset:1
Orientation:reverse strand
Alignment:CGGTTCGA
-GATTCGA

OPI1(MacIsaac)/Yeast

Match Rank:2
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:CGGTTCGA
CGGTTCG-

OPI1/MA0349.1/Jaspar

Match Rank:3
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:CGGTTCGA
CGGTTCG-

STB4/STB4_YPD/[](Harbison)/Yeast

Match Rank:4
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-CGGTTCGA
TCGGNNCGA

STB4(MacIsaac)/Yeast

Match Rank:5
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-CGGTTCGA
TCGGNNCGA

YER051W(MacIsaac)/Yeast

Match Rank:6
Score:0.73
Offset:3
Orientation:forward strand
Alignment:CGGTTCGA-
---TTCGAA

XBP1/MA0414.1/Jaspar

Match Rank:7
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:CGGTTCGA-
--NCTCGAG

Unknown3/Arabidopsis-Promoters/Homer

Match Rank:8
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CGGTTCGA-
CCGGTTTART

SMZ/MA0553.1/Jaspar

Match Rank:9
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CGGTTCGA--
--GTACGAGG

PB0034.1_Irf4_1/Jaspar

Match Rank:10
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CGGTTCGA----
TNTGGTTTCGATACN