Information for 11-DGTATATA (Motif 9)


Reverse Opposite:

p-value:1e-31
log p-value:-7.231e+01
Information Content per bp:1.840
Number of Target Sequences with motif2006.0
Percentage of Target Sequences with motif50.99%
Number of Background Sequences with motif8266.2
Percentage of Background Sequences with motif41.68%
Average Position of motif in Targets395.9 +/- 360.7bp
Average Position of motif in Background295.7 +/- 211.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.61
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TATA-box/SacCer-Promoters/Homer

Match Rank:1
Score:0.91
Offset:2
Orientation:reverse strand
Alignment:DGTATATA----
--TATATAWDVV

MOT2/MA0379.1/Jaspar

Match Rank:2
Score:0.88
Offset:2
Orientation:reverse strand
Alignment:DGTATATA
--TATAT-

Cf2/dmmpmm(Bergman)/fly

Match Rank:3
Score:0.85
Offset:1
Orientation:forward strand
Alignment:DGTATATA--
-GTATATATA

Cf2/MA0015.1/Jaspar

Match Rank:4
Score:0.83
Offset:1
Orientation:forward strand
Alignment:DGTATATA---
-GTATATATAC

NHP6A/MA0345.1/Jaspar

Match Rank:5
Score:0.83
Offset:-5
Orientation:reverse strand
Alignment:-----DGTATATA--------
NNATNNTTATATATAGNNNAN

PB0163.1_Six6_2/Jaspar

Match Rank:6
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---DGTATATA------
ANNNGGATATATCCNNN

POL012.1_TATA-Box/Jaspar

Match Rank:7
Score:0.79
Offset:1
Orientation:forward strand
Alignment:DGTATATA--------
-GTATAAAAGGCGGGG

TBP/MA0108.2/Jaspar

Match Rank:8
Score:0.79
Offset:1
Orientation:forward strand
Alignment:DGTATATA--------
-GTATAAAAGGCGGGG

SPT15/MA0386.1/Jaspar

Match Rank:9
Score:0.78
Offset:-4
Orientation:reverse strand
Alignment:----DGTATATA---------
NNNNAATATATATANCTANNN

PB0080.1_Tbp_1/Jaspar

Match Rank:10
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--DGTATATA------
NANTTATATATAANGN