Information for 5-GGCACGTG (Motif 4)


Reverse Opposite:

p-value:1e-46
log p-value:-1.076e+02
Information Content per bp:1.693
Number of Target Sequences with motif522.0
Percentage of Target Sequences with motif13.27%
Number of Background Sequences with motif1345.7
Percentage of Background Sequences with motif6.79%
Average Position of motif in Targets446.3 +/- 337.5bp
Average Position of motif in Background294.4 +/- 245.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

IBL1(bHLH)/Seedling-IBL1-ChIP-Seq(GSE51120)/Homer

Match Rank:1
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:GGCACGTG
GGCACGTG

BHLHE40/MA0464.2/Jaspar

Match Rank:2
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:GGCACGTG--
GTCACGTGAN

HEY1/MA0823.1/Jaspar

Match Rank:3
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:GGCACGTG--
GGCACGTGTC

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.94
Offset:-1
Orientation:reverse strand
Alignment:-GGCACGTG-
NGKCACGTGM

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:5
Score:0.93
Offset:0
Orientation:forward strand
Alignment:GGCACGTG
GNCACGTG

PHYPADRAFT_48267/MA1021.1/Jaspar

Match Rank:6
Score:0.93
Offset:1
Orientation:reverse strand
Alignment:GGCACGTG-
-GCACGTGG

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.93
Offset:0
Orientation:forward strand
Alignment:GGCACGTG
GHCACGTG

MNT/MA0825.1/Jaspar

Match Rank:8
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:GGCACGTG--
NGCACGTGNT

UNE10/MA1074.1/Jaspar

Match Rank:9
Score:0.93
Offset:1
Orientation:reverse strand
Alignment:GGCACGTG-
-GCACGTGG

HBI1/MA1025.1/Jaspar

Match Rank:10
Score:0.93
Offset:-2
Orientation:forward strand
Alignment:--GGCACGTG--
CGGGCACGTGCT