Information for 13-GVGTTCGA (Motif 11)


Reverse Opposite:

p-value:1e-27
log p-value:-6.358e+01
Information Content per bp:1.870
Number of Target Sequences with motif617.0
Percentage of Target Sequences with motif15.68%
Number of Background Sequences with motif1990.4
Percentage of Background Sequences with motif10.04%
Average Position of motif in Targets387.3 +/- 350.5bp
Average Position of motif in Background292.5 +/- 216.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

lin-14/MA0261.1/Jaspar

Match Rank:1
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:GVGTTCGA
GTGTTC--

MA0261.1_lin-14/Jaspar

Match Rank:2
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:GVGTTCGA
GTGTTC--

OPI1/Literature(Harbison)/Yeast

Match Rank:3
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:GVGTTCGA
-GATTCGA

OPI1(MacIsaac)/Yeast

Match Rank:4
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:GVGTTCGA
CGGTTCG-

OPI1/MA0349.1/Jaspar

Match Rank:5
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:GVGTTCGA
CGGTTCG-

YER051W(MacIsaac)/Yeast

Match Rank:6
Score:0.73
Offset:3
Orientation:forward strand
Alignment:GVGTTCGA-
---TTCGAA

XBP1/MA0414.1/Jaspar

Match Rank:7
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GVGTTCGA-
--NCTCGAG

Deaf1/dmmpmm(Pollard)/fly

Match Rank:8
Score:0.69
Offset:3
Orientation:forward strand
Alignment:GVGTTCGA-
---TTCGGG

Deaf1/MA0185.1/Jaspar

Match Rank:9
Score:0.69
Offset:3
Orientation:forward strand
Alignment:GVGTTCGA-
---TTCGGG

SNF1(MacIsaac)/Yeast

Match Rank:10
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GVGTTCGA-------
CCGGGTTCGATCCCCGG