Information for 9-GCGTGKGG (Motif 9)


Reverse Opposite:

p-value:1e-33
log p-value:-7.708e+01
Information Content per bp:1.871
Number of Target Sequences with motif287.0
Percentage of Target Sequences with motif6.62%
Number of Background Sequences with motif636.3
Percentage of Background Sequences with motif2.99%
Average Position of motif in Targets452.0 +/- 317.0bp
Average Position of motif in Background277.9 +/- 235.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-GCGTGKGG
TGCGTG---

ALFIN1(HD-PHD)/Medicago sativa/AthaMap

Match Rank:2
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-GCGTGKGG-
GAGGTGGGGC

YPR022C/MA0436.1/Jaspar

Match Rank:3
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:GCGTGKGG
-NGTGGGG

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:4
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--GCGTGKGG--
NTGGGTGTGGCC

Klf1/MA0493.1/Jaspar

Match Rank:5
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-GCGTGKGG--
TGGGTGTGGCN

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-GCGTGKGG-
TGGGTGTGGC

MET31(MacIsaac)/Yeast

Match Rank:7
Score:0.75
Offset:1
Orientation:forward strand
Alignment:GCGTGKGG-
-GGTGTGGC

Klf4/MA0039.2/Jaspar

Match Rank:8
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GCGTGKGG-
TGGGTGGGGC

SUT1?/SacCer-Promoters/Homer

Match Rank:9
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GCGTGKGG
GCGCGGGG

FHY3(FAR1)/Arabidopsis-FHY3-ChIP-Seq(GSE30711)/Homer

Match Rank:10
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----GCGTGKGG
NAVGCGCGTGDD-