Information for 7-CTCATCKC (Motif 7)


Reverse Opposite:

p-value:1e-40
log p-value:-9.320e+01
Information Content per bp:1.921
Number of Target Sequences with motif505.0
Percentage of Target Sequences with motif11.65%
Number of Background Sequences with motif1317.4
Percentage of Background Sequences with motif6.19%
Average Position of motif in Targets416.4 +/- 353.9bp
Average Position of motif in Background270.8 +/- 204.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TOD6?/SacCer-Promoters/Homer

Match Rank:1
Score:0.95
Offset:-2
Orientation:reverse strand
Alignment:--CTCATCKC
AKCTCATCGC

TOD6/MA0350.1/Jaspar

Match Rank:2
Score:0.89
Offset:-8
Orientation:forward strand
Alignment:--------CTCATCKC-----
AGGCACAGCTCATCGCGTTTT

DOT6/MA0351.1/Jaspar

Match Rank:3
Score:0.87
Offset:-8
Orientation:forward strand
Alignment:--------CTCATCKC-----
TTCTGCACCTCATCGCATCCT

CHA4(MacIsaac)/Yeast

Match Rank:4
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:CTCATCKC-
CTCATCGCA

CDC5(MYB)/Arabidopsis thaliana/AthaMap

Match Rank:5
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--CTCATCKC-
GGCTCAGCGCG

CDC5/MA0579.1/Jaspar

Match Rank:6
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--CTCATCKC-
GGCTCAGCGCG

GAT1/GAT1_RAPA/1-GZF3,2-GLN3(Harbison)/Yeast

Match Rank:7
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CTCATCKC
CTTATCT-

GAT1(MacIsaac)/Yeast

Match Rank:8
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CTCATCKC
CTTATCT-

GZF3/Literature(Harbison)/Yeast

Match Rank:9
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CTCATCKC
CTTATC--

GZF3(MacIsaac)/Yeast

Match Rank:10
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CTCATCKC
CTTATC--