Information for 4-GTCACGTG (Motif 4)


Reverse Opposite:

p-value:1e-62
log p-value:-1.440e+02
Information Content per bp:1.931
Number of Target Sequences with motif366.0
Percentage of Target Sequences with motif8.44%
Number of Background Sequences with motif663.7
Percentage of Background Sequences with motif3.12%
Average Position of motif in Targets398.2 +/- 287.4bp
Average Position of motif in Background288.0 +/- 210.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TYE7(MacIsaac)/Yeast

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:GTCACGTG
GTCACGTG

Arntl/MA0603.1/Jaspar

Match Rank:2
Score:0.99
Offset:-1
Orientation:forward strand
Alignment:-GTCACGTG-
GGTCACGTGC

CBF1(MacIsaac)/Yeast

Match Rank:3
Score:0.98
Offset:0
Orientation:forward strand
Alignment:GTCACGTG
GTCACGTG

Cbf1(bHLH)/Yeast-Cbf1-ChIP-Seq(GSE29506)/Homer

Match Rank:4
Score:0.97
Offset:-1
Orientation:reverse strand
Alignment:-GTCACGTG-
DRTCACGTGA

TYE7/MA0409.1/Jaspar

Match Rank:5
Score:0.97
Offset:1
Orientation:reverse strand
Alignment:GTCACGTG
-TCACGTG

CBF1/CBF1_SM/72-CBF1(Harbison)/Yeast

Match Rank:6
Score:0.97
Offset:1
Orientation:forward strand
Alignment:GTCACGTG
-TCACGTG

TFE3/MA0831.1/Jaspar

Match Rank:7
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:GTCACGTG--
GTCACGTGNT

TFEB/MA0692.1/Jaspar

Match Rank:8
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:GTCACGTG--
GTCACGTGAT

CBF1/MA0281.1/Jaspar

Match Rank:9
Score:0.96
Offset:1
Orientation:reverse strand
Alignment:GTCACGTG-
-TCACGTGC

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:10
Score:0.96
Offset:0
Orientation:forward strand
Alignment:GTCACGTG--
GTCACGTGGT