Information for 24-AAAAGTAA (Motif 19)


Reverse Opposite:

p-value:1e-9
log p-value:-2.295e+01
Information Content per bp:1.848
Number of Target Sequences with motif2236.0
Percentage of Target Sequences with motif51.59%
Number of Background Sequences with motif9956.5
Percentage of Background Sequences with motif46.76%
Average Position of motif in Targets406.5 +/- 345.9bp
Average Position of motif in Background277.5 +/- 184.6bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

tll/dmmpmm(Down)/fly

Match Rank:1
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-AAAAGTAA-
AAAAAGTNAA

CDF2/MA0973.1/Jaspar

Match Rank:2
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--AAAAGTAA
AAAAAAGTGA

Nr2e1/MA0676.1/Jaspar

Match Rank:3
Score:0.75
Offset:0
Orientation:forward strand
Alignment:AAAAGTAA-
AAAAGTCAA

AZF1/MA0277.1/Jaspar

Match Rank:4
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-AAAAGTAA
AAAAAGAAA

CDF3/MA0974.1/Jaspar

Match Rank:5
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-AAAAGTAA
AAAAAGTGC

tll/dmmpmm(SeSiMCMC)/fly

Match Rank:6
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:AAAAGTAA-
AAAAGTTAA

br-Z2/dmmpmm(Bergman)/fly

Match Rank:7
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-AAAAGTAA-
AAATAGAAAA

ovo/dmmpmm(Down)/fly

Match Rank:8
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:AAAAGTAA---
AAAAGTAACGG

tll/MA0459.1/Jaspar

Match Rank:9
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AAAAGTAA--
AAAAGTCAAA

tll/dmmpmm(Pollard)/fly

Match Rank:10
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:AAAAGTAA
-AAAGTCA