Information for 16-CCCATACA (Motif 13)


Reverse Opposite:

p-value:1e-21
log p-value:-4.868e+01
Information Content per bp:1.936
Number of Target Sequences with motif199.0
Percentage of Target Sequences with motif4.59%
Number of Background Sequences with motif461.8
Percentage of Background Sequences with motif2.17%
Average Position of motif in Targets363.1 +/- 244.2bp
Average Position of motif in Background294.2 +/- 208.1bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SFP1(MacIsaac)/Yeast

Match Rank:1
Score:0.88
Offset:-1
Orientation:reverse strand
Alignment:-CCCATACA-
ACCCGTACAT

SFP1/SFP1_SM/50-RAP1(Harbison)/Yeast

Match Rank:2
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-CCCATACA-
ACCCGTACAT

RAP1/MA0359.1/Jaspar

Match Rank:3
Score:0.86
Offset:-2
Orientation:forward strand
Alignment:--CCCATACA
CACCCATACA

RAP1/RAP1_YPD/85-RAP1(Harbison)/Yeast

Match Rank:4
Score:0.84
Offset:-2
Orientation:reverse strand
Alignment:--CCCATACA
CACCCGTACA

RAP1(MacIsaac)/Yeast

Match Rank:5
Score:0.82
Offset:-3
Orientation:forward strand
Alignment:---CCCATACA-
ACACCCATACAC

FHL1/FHL1_YPD/47-RAP1(Harbison)/Yeast

Match Rank:6
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--CCCATACA-
CACCCGTACAT

FHL1(MacIsaac)/Yeast

Match Rank:7
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-CCCATACA-
ATCCGTACAT

POPTR_0002s00440g/MA0955.1/Jaspar

Match Rank:8
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:CCCATACA
-CCGTACN

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:9
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---CCCATACA
TTCCCCCTAC-

sma-4/MA0925.1/Jaspar

Match Rank:10
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CCCATACA--
NNCCAGACANN