Information for 13-WTCCGKAC (Motif 11)


Reverse Opposite:

p-value:1e-28
log p-value:-6.496e+01
Information Content per bp:1.780
Number of Target Sequences with motif682.0
Percentage of Target Sequences with motif15.74%
Number of Background Sequences with motif2184.3
Percentage of Background Sequences with motif10.26%
Average Position of motif in Targets401.0 +/- 352.9bp
Average Position of motif in Background276.9 +/- 212.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

HAL9/MA0311.1/Jaspar

Match Rank:1
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:WTCCGKAC
TTCCG---

ASG1/MA0275.1/Jaspar

Match Rank:2
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:WTCCGKAC
TTCCGG--

SIP4/MA0380.1/Jaspar

Match Rank:3
Score:0.81
Offset:0
Orientation:forward strand
Alignment:WTCCGKAC
CTCCGGA-

ECM22/MA0292.1/Jaspar

Match Rank:4
Score:0.81
Offset:0
Orientation:forward strand
Alignment:WTCCGKAC
CTCCGGA-

SPL11/MA1056.1/Jaspar

Match Rank:5
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:WTCCGKAC----
NTCCGTACGNNN

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.80
Offset:-3
Orientation:forward strand
Alignment:---WTCCGKAC
NRYTTCCGGY-

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:7
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---WTCCGKAC
NRYTTCCGGH-

ETV5/MA0765.1/Jaspar

Match Rank:8
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---WTCCGKAC
NACTTCCGGT-

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---WTCCGKAC
HACTTCCGGY-

SPL14(SBP)/Arabidopsis thaliana/AthaMap

Match Rank:10
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----WTCCGKAC-------
TCGCGTCCGTACAGGAGGG