Information for 12-GGGCCGGC (Motif 9)


Reverse Opposite:

p-value:1e-31
log p-value:-7.249e+01
Information Content per bp:1.778
Number of Target Sequences with motif575.0
Percentage of Target Sequences with motif13.78%
Number of Background Sequences with motif1789.8
Percentage of Background Sequences with motif8.32%
Average Position of motif in Targets426.1 +/- 298.4bp
Average Position of motif in Background284.1 +/- 223.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ERF105/MA1000.1/Jaspar

Match Rank:1
Score:0.79
Offset:1
Orientation:forward strand
Alignment:GGGCCGGC-
-TGCCGGCG

ERF6/MA1006.1/Jaspar

Match Rank:2
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:GGGCCGGC--
NCGCCGGCAN

ERF13/MA1004.1/Jaspar

Match Rank:3
Score:0.78
Offset:1
Orientation:forward strand
Alignment:GGGCCGGC-
-CGCCGCCA

ERF098/MA0999.1/Jaspar

Match Rank:4
Score:0.77
Offset:0
Orientation:forward strand
Alignment:GGGCCGGC
CCGCCGCC

ERF096/MA0998.1/Jaspar

Match Rank:5
Score:0.76
Offset:0
Orientation:forward strand
Alignment:GGGCCGGC--
CCGCCGCCAT

CRF4/MA0976.1/Jaspar

Match Rank:6
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GGGCCGGC
GCGCCGCC

ERF094/MA1049.1/Jaspar

Match Rank:7
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GGGCCGGC-
-CGCCGCCG

SKN7(MacIsaac)/Yeast

Match Rank:8
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GGGCCGGC
GGCCCGGA

RDS1/MA0361.1/Jaspar

Match Rank:9
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GGGCCGGC
CGGCCGA-

RAP2-10/MA0980.1/Jaspar

Match Rank:10
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GGGCCGGC
GCGCCGCC