Information for 10-TCATCGCR (Motif 8)


Reverse Opposite:

p-value:1e-34
log p-value:-7.986e+01
Information Content per bp:1.895
Number of Target Sequences with motif552.0
Percentage of Target Sequences with motif13.23%
Number of Background Sequences with motif1647.0
Percentage of Background Sequences with motif7.66%
Average Position of motif in Targets426.3 +/- 409.4bp
Average Position of motif in Background272.0 +/- 194.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CHA4(MacIsaac)/Yeast

Match Rank:1
Score:0.93
Offset:-1
Orientation:reverse strand
Alignment:-TCATCGCR
CTCATCGCA

TOD6/MA0350.1/Jaspar

Match Rank:2
Score:0.84
Offset:-9
Orientation:forward strand
Alignment:---------TCATCGCR----
AGGCACAGCTCATCGCGTTTT

DOT6/MA0351.1/Jaspar

Match Rank:3
Score:0.83
Offset:-9
Orientation:forward strand
Alignment:---------TCATCGCR----
TTCTGCACCTCATCGCATCCT

TOD6?/SacCer-Promoters/Homer

Match Rank:4
Score:0.80
Offset:-3
Orientation:reverse strand
Alignment:---TCATCGCR
AKCTCATCGC-

CDC5(MYB)/Arabidopsis thaliana/AthaMap

Match Rank:5
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TCATCGCR
GGCTCAGCGCG

CDC5/MA0579.1/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TCATCGCR
GGCTCAGCGCG

Run/dmmpmm(Papatsenko)/fly

Match Rank:7
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TCATCGCR
-CACCGCC

GATA15/MA1016.1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TCATCGCR
NNGATCANN

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TCATCGCR
GTCATN---

RSC3/MA0374.1/Jaspar

Match Rank:10
Score:0.62
Offset:4
Orientation:forward strand
Alignment:TCATCGCR---
----CGCGCGG