Information for 5-GTCACGTG (Motif 4)


Reverse Opposite:

p-value:1e-59
log p-value:-1.362e+02
Information Content per bp:1.946
Number of Target Sequences with motif425.0
Percentage of Target Sequences with motif10.19%
Number of Background Sequences with motif910.1
Percentage of Background Sequences with motif4.23%
Average Position of motif in Targets406.7 +/- 301.4bp
Average Position of motif in Background270.7 +/- 206.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CBF1(MacIsaac)/Yeast

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:GTCACGTG
GTCACGTG

Arntl/MA0603.1/Jaspar

Match Rank:2
Score:0.98
Offset:-1
Orientation:forward strand
Alignment:-GTCACGTG-
GGTCACGTGC

TYE7(MacIsaac)/Yeast

Match Rank:3
Score:0.98
Offset:0
Orientation:forward strand
Alignment:GTCACGTG
GTCACGTG

TFE3/MA0831.1/Jaspar

Match Rank:4
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:GTCACGTG--
GTCACGTGNT

TYE7/MA0409.1/Jaspar

Match Rank:5
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:GTCACGTG
-TCACGTG

CBF1/CBF1_SM/72-CBF1(Harbison)/Yeast

Match Rank:6
Score:0.95
Offset:1
Orientation:forward strand
Alignment:GTCACGTG
-TCACGTG

Cbf1(bHLH)/Yeast-Cbf1-ChIP-Seq(GSE29506)/Homer

Match Rank:7
Score:0.95
Offset:-1
Orientation:reverse strand
Alignment:-GTCACGTG-
DRTCACGTGA

TFEB/MA0692.1/Jaspar

Match Rank:8
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:GTCACGTG--
GTCACGTGAT

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-GTCACGTG-
GGTCACGTGA

CBF1/MA0281.1/Jaspar

Match Rank:10
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:GTCACGTG-
-TCACGTGC