Information for 3-GGGAAAAA (Motif 3)


Reverse Opposite:

p-value:1e-85
log p-value:-1.964e+02
Information Content per bp:1.834
Number of Target Sequences with motif1317.0
Percentage of Target Sequences with motif31.57%
Number of Background Sequences with motif4052.5
Percentage of Background Sequences with motif18.84%
Average Position of motif in Targets386.2 +/- 319.3bp
Average Position of motif in Background272.6 +/- 199.3bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.35
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

EDS1/MA0294.1/Jaspar

Match Rank:1
Score:0.85
Offset:0
Orientation:forward strand
Alignment:GGGAAAAA-
CGGAAAAAT

RGT1(MacIsaac)/Yeast

Match Rank:2
Score:0.84
Offset:-2
Orientation:forward strand
Alignment:--GGGAAAAA
GCCGGAAAAA

hb/dmmpmm(SeSiMCMC)/fly

Match Rank:3
Score:0.81
Offset:2
Orientation:reverse strand
Alignment:GGGAAAAA
--AAAAAA

STB3/MA0390.1/Jaspar

Match Rank:4
Score:0.79
Offset:-5
Orientation:reverse strand
Alignment:-----GGGAAAAA--------
NNNNAGTGAAAAATTTTNGAC

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:5
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---GGGAAAAA---
TACTGGAAAAAAAA

dl/dmmpmm(Pollard)/fly

Match Rank:6
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:GGGAAAAA--
GGGAAAATCC

NFATC2/MA0152.1/Jaspar

Match Rank:7
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:GGGAAAAA
TGGAAAA-

dl-A/dmmpmm(Bergman)/fly

Match Rank:8
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:GGGAAAAA---
NGGAAAAACCC

kni/dmmpmm(Papatsenko)/fly

Match Rank:9
Score:0.77
Offset:0
Orientation:forward strand
Alignment:GGGAAAAA-
GGGAACAAA

dl/dmmpmm(Bigfoot)/fly

Match Rank:10
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:GGGAAAAA---
GGGGAAAATCC