Information for 23-AGCTCGCA (Motif 16)


Reverse Opposite:

p-value:1e-11
log p-value:-2.608e+01
Information Content per bp:1.843
Number of Target Sequences with motif242.0
Percentage of Target Sequences with motif5.80%
Number of Background Sequences with motif785.3
Percentage of Background Sequences with motif3.65%
Average Position of motif in Targets447.6 +/- 353.2bp
Average Position of motif in Background271.2 +/- 187.8bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CEP3/MA0282.1/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:AGCTCGCA--
--CTCGGAAA

STB4/MA0391.1/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AGCTCGCA-
--CTCGGAA

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AGCTCGCA
NGCTN---

Nr2e3/MA0164.1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AGCTCGCA
AAGCTTG--

XBP1/Literature(Harbison)/Yeast

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AGCTCGCA-
--CTCGAAG

ROX1(MacIsaac)/Yeast

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AGCTCGCA
ANAAGCCCGC-

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AGCTCGCA
NAACAGCTGG--

POL013.1_MED-1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGCTCGCA
-GCTCCG-

SMZ/MA0553.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGCTCGCA-
-CCTCGTAC

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGCTCGCA---
-GCTCGGSCTC