Information for 22-GTATAGTG (Motif 15)


Reverse Opposite:

p-value:1e-11
log p-value:-2.678e+01
Information Content per bp:1.606
Number of Target Sequences with motif965.0
Percentage of Target Sequences with motif23.13%
Number of Background Sequences with motif4049.0
Percentage of Background Sequences with motif18.83%
Average Position of motif in Targets357.8 +/- 317.6bp
Average Position of motif in Background269.6 +/- 185.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GTATAGTG--
BTBRAGTGSN

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GTATAGTG---
-TTGAGTGSTT

Unknown2/Drosophila-Promoters/Homer

Match Rank:3
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GTATAGTG---
---TAGKGATG

YER130C/MA0423.1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GTATAGTG--
-NATAGGGGN

PB0128.1_Gcm1_2/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GTATAGTG------
TGCGCATAGGGGAGGAG

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTATAGTG--
CTYRAGTGSY

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GTATAGTG---
-TTRAGTGSYK

MATA1(MacIsaac)/Yeast

Match Rank:8
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GTATAGTG-
--ATTGTGC

HMRA1/MA0327.1/Jaspar

Match Rank:9
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GTATAGTG-
--ATTGTGC

Cf2-II/dmmpmm(Pollard)/fly

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GTATAGTG
GAGTATAA--