Information for 21-AAAGGAAA (Motif 14)


Reverse Opposite:

p-value:1e-11
log p-value:-2.702e+01
Information Content per bp:1.839
Number of Target Sequences with motif885.0
Percentage of Target Sequences with motif21.21%
Number of Background Sequences with motif3664.8
Percentage of Background Sequences with motif17.04%
Average Position of motif in Targets391.1 +/- 322.9bp
Average Position of motif in Background269.5 +/- 182.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC3/MA0625.1/Jaspar

Match Rank:1
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:AAAGGAAA--
AATGGAAAAT

NFATC1/MA0624.1/Jaspar

Match Rank:2
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:AAAGGAAA--
NNTGGAAANN

SPIB/MA0081.1/Jaspar

Match Rank:3
Score:0.79
Offset:0
Orientation:forward strand
Alignment:AAAGGAAA
AGAGGAA-

RME1(MacIsaac)/Yeast

Match Rank:4
Score:0.79
Offset:-3
Orientation:forward strand
Alignment:---AAAGGAAA
TCCAAAGGAA-

RME1/MA0370.1/Jaspar

Match Rank:5
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---AAAGGAAA
TCCAAAGGAA-

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-AAAGGAAA-
NACAGGAAAT

AZF1/MA0277.1/Jaspar

Match Rank:7
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-AAAGGAAA
AAAAAGAAA

PB0033.1_Irf3_1/Jaspar

Match Rank:8
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---AAAGGAAA---
GAGAACCGAAACTG

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:9
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:AAAGGAAA--
AATGGAAAAT

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-AAAGGAAA-
NACAGGAAAT