Information for 17-SGGTTCGA (Motif 13)


Reverse Opposite:

p-value:1e-21
log p-value:-5.040e+01
Information Content per bp:1.915
Number of Target Sequences with motif196.0
Percentage of Target Sequences with motif4.70%
Number of Background Sequences with motif466.4
Percentage of Background Sequences with motif2.17%
Average Position of motif in Targets298.9 +/- 260.7bp
Average Position of motif in Background258.0 +/- 202.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

OPI1/Literature(Harbison)/Yeast

Match Rank:1
Score:0.92
Offset:1
Orientation:reverse strand
Alignment:SGGTTCGA
-GATTCGA

OPI1(MacIsaac)/Yeast

Match Rank:2
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:SGGTTCGA
CGGTTCG-

OPI1/MA0349.1/Jaspar

Match Rank:3
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:SGGTTCGA
CGGTTCG-

XBP1/MA0414.1/Jaspar

Match Rank:4
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:SGGTTCGA-
--NCTCGAG

STB4/STB4_YPD/[](Harbison)/Yeast

Match Rank:5
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-SGGTTCGA
TCGGNNCGA

STB4(MacIsaac)/Yeast

Match Rank:6
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-SGGTTCGA
TCGGNNCGA

YER051W(MacIsaac)/Yeast

Match Rank:7
Score:0.73
Offset:3
Orientation:forward strand
Alignment:SGGTTCGA-
---TTCGAA

PB0034.1_Irf4_1/Jaspar

Match Rank:8
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---SGGTTCGA----
TNTGGTTTCGATACN

lin-14/MA0261.1/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:SGGTTCGA
GTGTTC--

MA0261.1_lin-14/Jaspar

Match Rank:10
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:SGGTTCGA
GTGTTC--