Information for 13-TGCACGGA (Motif 10)


Reverse Opposite:

p-value:1e-30
log p-value:-7.062e+01
Information Content per bp:1.834
Number of Target Sequences with motif317.0
Percentage of Target Sequences with motif7.60%
Number of Background Sequences with motif802.2
Percentage of Background Sequences with motif3.73%
Average Position of motif in Targets487.5 +/- 389.0bp
Average Position of motif in Background284.7 +/- 205.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

FHL1(MacIsaac)/Yeast

Match Rank:1
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-TGCACGGA-
ATGTACGGAT

SPL14(SBP)/Arabidopsis thaliana/AthaMap

Match Rank:2
Score:0.79
Offset:-6
Orientation:reverse strand
Alignment:------TGCACGGA-----
CCCTNCTGTACGGACGNNA

SPL14/MA0586.1/Jaspar

Match Rank:3
Score:0.79
Offset:-6
Orientation:reverse strand
Alignment:------TGCACGGA-----
CCCTNCTGTACGGACGNNA

FHL1/FHL1_YPD/47-RAP1(Harbison)/Yeast

Match Rank:4
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-TGCACGGA--
ATGTACGGGTG

SFP1/SFP1_SM/50-RAP1(Harbison)/Yeast

Match Rank:5
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TGCACGGA-
ATGTACGGGT

SFP1(MacIsaac)/Yeast

Match Rank:6
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TGCACGGA-
ATGTACGGGT

SPL11/MA1056.1/Jaspar

Match Rank:7
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---TGCACGGA-
TATCGTACGGAT

YKL222C/MA0428.1/Jaspar

Match Rank:8
Score:0.72
Offset:2
Orientation:forward strand
Alignment:TGCACGGA---
--AACGGAAAT

HAL9/MA0311.1/Jaspar

Match Rank:9
Score:0.71
Offset:4
Orientation:forward strand
Alignment:TGCACGGA-
----CGGAA

SPL5/MA1059.1/Jaspar

Match Rank:10
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TGCACGGA
TTGTACGGC