Information for 10-CCGTGCAW (Motif 9)


Reverse Opposite:

p-value:1e-35
log p-value:-8.222e+01
Information Content per bp:1.707
Number of Target Sequences with motif660.0
Percentage of Target Sequences with motif14.93%
Number of Background Sequences with motif1902.3
Percentage of Background Sequences with motif9.05%
Average Position of motif in Targets423.7 +/- 313.2bp
Average Position of motif in Background283.6 +/- 203.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

FHL1(MacIsaac)/Yeast

Match Rank:1
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--CCGTGCAW
ATCCGTACAT

SPL14(SBP)/Arabidopsis thaliana/AthaMap

Match Rank:2
Score:0.73
Offset:-6
Orientation:forward strand
Alignment:------CCGTGCAW-----
TCGCGTCCGTACAGGAGGG

SPL14/MA0586.1/Jaspar

Match Rank:3
Score:0.73
Offset:-6
Orientation:forward strand
Alignment:------CCGTGCAW-----
TCGCGTCCGTACAGGAGGG

SPL5/MA1059.1/Jaspar

Match Rank:4
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CCGTGCAW
NCCGTACNN

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:5
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--CCGTGCAW
GGACGTGC--

SPL12/MA1057.1/Jaspar

Match Rank:6
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CCGTGCAW
NCCGTACN-

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:7
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CCGTGCAW
RTACGTGC--

FHL1/FHL1_YPD/47-RAP1(Harbison)/Yeast

Match Rank:8
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CCGTGCAW
CACCCGTACAT

POPTR_0002s00440g/MA0955.1/Jaspar

Match Rank:9
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CCGTGCAW
CCGTACN-

SFP1/SFP1_SM/50-RAP1(Harbison)/Yeast

Match Rank:10
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CCGTGCAW
ACCCGTACAT