Information for 9-VGGGCGGG (Motif 8)


Reverse Opposite:

p-value:1e-38
log p-value:-8.857e+01
Information Content per bp:1.649
Number of Target Sequences with motif880.0
Percentage of Target Sequences with motif19.90%
Number of Background Sequences with motif2707.1
Percentage of Background Sequences with motif12.88%
Average Position of motif in Targets483.5 +/- 365.9bp
Average Position of motif in Background291.5 +/- 235.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.27
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SP1/MA0079.3/Jaspar

Match Rank:1
Score:0.84
Offset:-1
Orientation:reverse strand
Alignment:-VGGGCGGG--
GGGGGCGGGGC

SP2/MA0516.1/Jaspar

Match Rank:2
Score:0.82
Offset:-5
Orientation:reverse strand
Alignment:-----VGGGCGGG--
GGGNGGGGGCGGGGC

PB0110.1_Bcl6b_2/Jaspar

Match Rank:3
Score:0.81
Offset:-5
Orientation:reverse strand
Alignment:-----VGGGCGGG---
NNTNAGGGGCGGNNNN

PB0202.1_Zfp410_2/Jaspar

Match Rank:4
Score:0.81
Offset:-5
Orientation:reverse strand
Alignment:-----VGGGCGGG----
NNTNNGGGGCGGNGNGN

KLF5/MA0599.1/Jaspar

Match Rank:5
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:VGGGCGGG--
GGGGNGGGGC

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.80
Offset:1
Orientation:forward strand
Alignment:VGGGCGGG-
-GGGGGGGG

btd/dmmpmm(Noyes)/fly

Match Rank:7
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-VGGGCGGG-
GGGGGCGGAT

btd/MA0443.1/Jaspar

Match Rank:8
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--VGGGCGGG
AGGGGGCGGA

Sp1(Zf)/Promoter/Homer

Match Rank:9
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-VGGGCGGG---
GGGGGCGGGGCC

POL003.1_GC-box/Jaspar

Match Rank:10
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--VGGGCGGG----
AGGGGGCGGGGCTG