Information for 5-CGCGBCGC (Motif 5)


Reverse Opposite:

p-value:1e-64
log p-value:-1.492e+02
Information Content per bp:1.413
Number of Target Sequences with motif1183.0
Percentage of Target Sequences with motif26.75%
Number of Background Sequences with motif3479.7
Percentage of Background Sequences with motif16.56%
Average Position of motif in Targets445.6 +/- 343.5bp
Average Position of motif in Background283.7 +/- 227.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.37
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SWI6(MacIsaac)/Yeast

Match Rank:1
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:CGCGBCGC
CGCGTC--

RSC3/MA0374.1/Jaspar

Match Rank:2
Score:0.76
Offset:0
Orientation:forward strand
Alignment:CGCGBCGC
CGCGCGG-

STP1(MacIsaac)/Yeast

Match Rank:3
Score:0.76
Offset:0
Orientation:forward strand
Alignment:CGCGBCGC
TGCGGCGC

MBP1(MacIsaac)/Yeast

Match Rank:4
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-CGCGBCGC
ACGCGTC--

STP1/MA0394.1/Jaspar

Match Rank:5
Score:0.74
Offset:0
Orientation:forward strand
Alignment:CGCGBCGC
TGCGGCGC

ERF109/MA1053.1/Jaspar

Match Rank:6
Score:0.73
Offset:1
Orientation:forward strand
Alignment:CGCGBCGC-
-GCGCCGCC

PHO2/PHO2_H2O2Hi/[](Harbison)/Yeast

Match Rank:7
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CGCGBCGC---
CGCACCGCACG

RAP2-10/MA0980.1/Jaspar

Match Rank:8
Score:0.73
Offset:1
Orientation:forward strand
Alignment:CGCGBCGC-
-GCGCCGCC

RAP2-3/MA1051.1/Jaspar

Match Rank:9
Score:0.73
Offset:1
Orientation:forward strand
Alignment:CGCGBCGC-
-GCGCCGCC

MBP1/MBP1_H2O2Hi/[](Harbison)/Yeast

Match Rank:10
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CGCGBCGC
ACGCGTC--