Information for 24-CTATAGTG (Motif 18)


Reverse Opposite:

p-value:1e-12
log p-value:-2.870e+01
Information Content per bp:1.895
Number of Target Sequences with motif636.0
Percentage of Target Sequences with motif14.38%
Number of Background Sequences with motif2284.7
Percentage of Background Sequences with motif10.87%
Average Position of motif in Targets350.1 +/- 317.6bp
Average Position of motif in Background279.6 +/- 191.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX9/MA0077.1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CTATAGTG-
CCATTGTTC

Dref/dmmpmm(SeSiMCMC)/fly

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CTATAGTG--
CTATCGATAT

Dref/dmmpmm(Bigfoot)/fly

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CTATAGTG--
CTATCGATAT

MOT2/MA0379.1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTATAGTG
-TATAT--

D/MA0445.1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CTATAGTG--
TCCATTGTTCT

br-Z2/dmmpmm(Bigfoot)/fly

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CTATAGTG
CTATTTA-

PB0073.1_Sox7_1/Jaspar

Match Rank:7
Score:0.62
Offset:-7
Orientation:reverse strand
Alignment:-------CTATAGTG-------
TNNANNTCTATTGTTNTNNANN

TBP(- other)/several species/AthaMap

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTATAGTG---
ACTATAAATACC

PB0183.1_Sry_2/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CTATAGTG------
CNNNTATTGTTCNNNNN

ROX1/Literature(Harbison)/Yeast

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTATAGTG
CCCATTGTT