Information for 22-GCCTTAAC (Motif 16)


Reverse Opposite:

p-value:1e-15
log p-value:-3.529e+01
Information Content per bp:1.494
Number of Target Sequences with motif231.0
Percentage of Target Sequences with motif5.22%
Number of Background Sequences with motif621.8
Percentage of Background Sequences with motif2.96%
Average Position of motif in Targets442.8 +/- 315.3bp
Average Position of motif in Background288.9 +/- 178.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TRB2/MA1073.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GCCTTAAC
TGCCCTAA-

pho/dmmpmm(Pollard)/fly

Match Rank:2
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GCCTTAAC---
GAAGCCATAACGGC

RPH1/Literature(Harbison)/Yeast

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GCCTTAAC---
-CCTTAAGGGG

RPH1(MacIsaac)/Yeast

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GCCTTAAC---
-CCTTAAGGGG

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCCTTAAC--
NCCTTATCTG

srp/dmmpmm(Bergman)/fly

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCCTTAAC--
NTCTTATCGC

GZF3/Literature(Harbison)/Yeast

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GCCTTAAC
--CTTATC

GZF3(MacIsaac)/Yeast

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GCCTTAAC
--CTTATC

Unknown5/Drosophila-Promoters/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GCCTTAAC---
-BSTTATCAGC

SKN7/MA0381.1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GCCTTAAC
NTGGCC-----