Information for 20-GAAAATTT (Motif 15)


Reverse Opposite:

p-value:1e-16
log p-value:-3.847e+01
Information Content per bp:1.958
Number of Target Sequences with motif1043.0
Percentage of Target Sequences with motif23.59%
Number of Background Sequences with motif3889.8
Percentage of Background Sequences with motif18.51%
Average Position of motif in Targets352.8 +/- 336.6bp
Average Position of motif in Background282.9 +/- 178.0bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SFP1/SacCer-Promoters/Homer

Match Rank:1
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:GAAAATTT----
RAAAATTTTTHH

SFP1/MA0378.1/Jaspar

Match Rank:2
Score:0.79
Offset:-5
Orientation:reverse strand
Alignment:-----GAAAATTT--------
CNGNAGAAAATTTTTTNNNNT

SUM1/MA0398.1/Jaspar

Match Rank:3
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:GAAAATTT-
AAAAATTTT

cad/dmmpmm(Down)/fly

Match Rank:4
Score:0.76
Offset:0
Orientation:forward strand
Alignment:GAAAATTT
AAAAATTT

STB3/MA0390.1/Jaspar

Match Rank:5
Score:0.74
Offset:-7
Orientation:reverse strand
Alignment:-------GAAAATTT------
NNNNAGTGAAAAATTTTNGAC

NFAT5/MA0606.1/Jaspar

Match Rank:6
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----GAAAATTT
NATGGAAAAN--

NFATC2/MA0152.1/Jaspar

Match Rank:7
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GAAAATTT
TGGAAAA---

NFATC3/MA0625.1/Jaspar

Match Rank:8
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----GAAAATTT
AATGGAAAAT--

EDS1/MA0294.1/Jaspar

Match Rank:9
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GAAAATTT
CGGAAAAAT-

RLR1/RLR1_YPD/[](Harbison)/Yeast

Match Rank:10
Score:0.68
Offset:-6
Orientation:reverse strand
Alignment:------GAAAATTT
AAAGAAGAAAAT--