Information for 19-TATSDCAT (Motif 14)


Reverse Opposite:

p-value:1e-20
log p-value:-4.697e+01
Information Content per bp:1.594
Number of Target Sequences with motif419.0
Percentage of Target Sequences with motif9.48%
Number of Background Sequences with motif1236.9
Percentage of Background Sequences with motif5.89%
Average Position of motif in Targets338.4 +/- 257.9bp
Average Position of motif in Background276.6 +/- 186.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Optix/dmmpmm(Noyes_hd)/fly

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TATSDCAT
NNTATCACTT

TRB2/MA1073.1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TATSDCAT
TTAGGGCA-

STP4/MA0397.1/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TATSDCAT
GATAGCGCA-

STP3/MA0396.1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TATSDCAT
GCTAGCGCA-

Optix/dmmpmm(Noyes)/fly

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TATSDCAT
TATCACNT

prd/dmmpmm(Bigfoot)/fly

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TATSDCAT
ATTATCAC--

prd/dmmpmm(SeSiMCMC)/fly

Match Rank:7
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TATSDCAT
GATTATCAC--

SKO1(MacIsaac)/Yeast

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TATSDCAT
TACGTCAT

srp/dmmpmm(Bergman)/fly

Match Rank:9
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TATSDCAT
NTCTTATCGC--

CDX2/MA0465.1/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TATSDCAT
TTTTATGGCTN