Information for 14-GSGTTCGA (Motif 11)


Reverse Opposite:

p-value:1e-29
log p-value:-6.896e+01
Information Content per bp:1.746
Number of Target Sequences with motif263.0
Percentage of Target Sequences with motif5.95%
Number of Background Sequences with motif570.5
Percentage of Background Sequences with motif2.71%
Average Position of motif in Targets342.5 +/- 282.1bp
Average Position of motif in Background298.6 +/- 193.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

OPI1/Literature(Harbison)/Yeast

Match Rank:1
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:GSGTTCGA
-GATTCGA

XBP1/MA0414.1/Jaspar

Match Rank:2
Score:0.80
Offset:2
Orientation:reverse strand
Alignment:GSGTTCGA-
--NCTCGAG

OPI1(MacIsaac)/Yeast

Match Rank:3
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:GSGTTCGA
CGGTTCG-

OPI1/MA0349.1/Jaspar

Match Rank:4
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:GSGTTCGA
CGGTTCG-

YER051W(MacIsaac)/Yeast

Match Rank:5
Score:0.73
Offset:3
Orientation:forward strand
Alignment:GSGTTCGA-
---TTCGAA

STB4/STB4_YPD/[](Harbison)/Yeast

Match Rank:6
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GSGTTCGA
TCGGNNCGA

STB4(MacIsaac)/Yeast

Match Rank:7
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GSGTTCGA
TCGGNNCGA

lin-14/MA0261.1/Jaspar

Match Rank:8
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GSGTTCGA
GTGTTC--

MA0261.1_lin-14/Jaspar

Match Rank:9
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GSGTTCGA
GTGTTC--

SMZ/MA0553.1/Jaspar

Match Rank:10
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GSGTTCGA--
--GTACGAGG