Information for 2-CGCGBSRC (Motif 2)


Reverse Opposite:

p-value:1e-99
log p-value:-2.301e+02
Information Content per bp:1.443
Number of Target Sequences with motif1775.0
Percentage of Target Sequences with motif43.04%
Number of Background Sequences with motif5962.1
Percentage of Background Sequences with motif27.56%
Average Position of motif in Targets428.1 +/- 339.2bp
Average Position of motif in Background268.0 +/- 225.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.82
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RSC3/MA0374.1/Jaspar

Match Rank:1
Score:0.91
Offset:0
Orientation:forward strand
Alignment:CGCGBSRC
CGCGCGG-

MBP1/MA0329.1/Jaspar

Match Rank:2
Score:0.89
Offset:-2
Orientation:reverse strand
Alignment:--CGCGBSRC
NNCGCGT---

Tcfl5/MA0632.1/Jaspar

Match Rank:3
Score:0.83
Offset:-2
Orientation:forward strand
Alignment:--CGCGBSRC
GGCACGTGCC

SUT1/MA0399.1/Jaspar

Match Rank:4
Score:0.82
Offset:0
Orientation:forward strand
Alignment:CGCGBSRC
CGCGGGG-

SUT1(MacIsaac)/Yeast

Match Rank:5
Score:0.82
Offset:0
Orientation:forward strand
Alignment:CGCGBSRC
CGCGGGG-

SWI6(MacIsaac)/Yeast

Match Rank:6
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:CGCGBSRC
CGCGTC--

RSC30/MA0375.1/Jaspar

Match Rank:7
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--CGCGBSRC
CGCGCGCG--

CMTA3/MA0970.1/Jaspar

Match Rank:8
Score:0.80
Offset:-4
Orientation:reverse strand
Alignment:----CGCGBSRC
NNNACGCGG---

CMTA2/MA0969.1/Jaspar

Match Rank:9
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-CGCGBSRC
ACGCGGNNN

MBP1::SWI6/MA0330.1/Jaspar

Match Rank:10
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--CGCGBSRC
AACGCGT---