Information for 24-GYACTCAC (Motif 16)


Reverse Opposite:

p-value:1e-13
log p-value:-3.191e+01
Information Content per bp:1.788
Number of Target Sequences with motif282.0
Percentage of Target Sequences with motif6.84%
Number of Background Sequences with motif917.8
Percentage of Background Sequences with motif4.24%
Average Position of motif in Targets434.9 +/- 339.6bp
Average Position of motif in Background269.8 +/- 179.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

z/dmmpmm(Bigfoot)/fly

Match Rank:1
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:GYACTCAC
-CACTCA-

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:2
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--GYACTCAC
AAGCACTTAA

z/dmmpmm(Down)/fly

Match Rank:3
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:GYACTCAC
-CACTCA-

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:4
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GYACTCAC
MRSCACTYAA

z/dmmpmm(SeSiMCMC)/fly

Match Rank:5
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:GYACTCAC
-CACTCAA

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:6
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GYACTCAC-
AGCCACTCAAG

ARR1/Literature(Harbison)/Yeast

Match Rank:7
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GYACTCAC
TTACTAA-

YAP3/Literature(Harbison)/Yeast

Match Rank:8
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GYACTCAC
TTACTAA-

YAP5/Literature(Harbison)/Yeast

Match Rank:9
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GYACTCAC
TTACTAA-

YAP6/Literature(Harbison)/Yeast

Match Rank:10
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GYACTCAC
TTACTAA-