Information for 18-TGCACGGA (Motif 12)


Reverse Opposite:

p-value:1e-22
log p-value:-5.115e+01
Information Content per bp:1.887
Number of Target Sequences with motif289.0
Percentage of Target Sequences with motif7.01%
Number of Background Sequences with motif814.5
Percentage of Background Sequences with motif3.77%
Average Position of motif in Targets422.3 +/- 315.5bp
Average Position of motif in Background280.7 +/- 197.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SPL14(SBP)/Arabidopsis thaliana/AthaMap

Match Rank:1
Score:0.82
Offset:-6
Orientation:reverse strand
Alignment:------TGCACGGA-----
CCCTNCTGTACGGACGNNA

SPL14/MA0586.1/Jaspar

Match Rank:2
Score:0.82
Offset:-6
Orientation:reverse strand
Alignment:------TGCACGGA-----
CCCTNCTGTACGGACGNNA

FHL1(MacIsaac)/Yeast

Match Rank:3
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-TGCACGGA-
ATGTACGGAT

SPL11/MA1056.1/Jaspar

Match Rank:4
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---TGCACGGA-
TATCGTACGGAT

FHL1/FHL1_YPD/47-RAP1(Harbison)/Yeast

Match Rank:5
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-TGCACGGA--
ATGTACGGGTG

SFP1/SFP1_SM/50-RAP1(Harbison)/Yeast

Match Rank:6
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TGCACGGA-
ATGTACGGGT

HAL9/MA0311.1/Jaspar

Match Rank:7
Score:0.74
Offset:4
Orientation:forward strand
Alignment:TGCACGGA-
----CGGAA

SPL5/MA1059.1/Jaspar

Match Rank:8
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-TGCACGGA
TTGTACGGC

SFP1(MacIsaac)/Yeast

Match Rank:9
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-TGCACGGA-
ATGTACGGGT

YKL222C/MA0428.1/Jaspar

Match Rank:10
Score:0.74
Offset:2
Orientation:forward strand
Alignment:TGCACGGA---
--AACGGAAAT