p-value: | 1e-24 |
log p-value: | -5.566e+01 |
Information Content per bp: | 1.786 |
Number of Target Sequences with motif | 710.0 |
Percentage of Target Sequences with motif | 17.22% |
Number of Background Sequences with motif | 2545.1 |
Percentage of Background Sequences with motif | 11.77% |
Average Position of motif in Targets | 448.3 +/- 376.2bp |
Average Position of motif in Background | 266.9 +/- 196.1bp |
Strand Bias (log2 ratio + to - strand density) | -0.0 |
Multiplicity (# of sites on avg that occur together) | 1.19 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
Trl(Zf)/S2-GAGAfactor-ChIP-Seq(GSE40646)/Homer
Match Rank: | 1 |
Score: | 0.78 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AGAGCGAG RGAGAGAG |
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SeqBias: GA-repeat
Match Rank: | 2 |
Score: | 0.77 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AGAGCGAG- GAGAGAGAGA |
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Trl/dmmpmm(Down)/fly
Match Rank: | 3 |
Score: | 0.74 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AGAGCGAG--- GAGAGAGAGAGC |
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Trl/dmmpmm(Bigfoot)/fly
Match Rank: | 4 |
Score: | 0.74 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AGAGCGAG----- AGAGAGAGAGNAA |
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GAGA-repeat/Arabidopsis-Promoters/Homer
Match Rank: | 5 |
Score: | 0.72 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --AGAGCGAG RGAGAGAGAG |
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Trl/dmmpmm(Pollard)/fly
Match Rank: | 6 |
Score: | 0.71 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AGAGCGAG- GAGAGAGCAA |
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Trl/MA0205.1/Jaspar
Match Rank: | 7 |
Score: | 0.71 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -AGAGCGAG- GAGAGAGCAA |
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z/dmmpmm(Down)/fly
Match Rank: | 8 |
Score: | 0.67 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AGAGCGAG TGAGTG-- |
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Trl/dmmpmm(SeSiMCMC)/fly
Match Rank: | 9 |
Score: | 0.64 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AGAGCGAG----- GAGAGAGAGAGCAA |
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z/dmmpmm(Pollard)/fly
Match Rank: | 10 |
Score: | 0.64 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AGAGCGAG- TTGAGTGATT |
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