Information for 16-MAAGGGGC (Motif 10)


Reverse Opposite:

p-value:1e-24
log p-value:-5.664e+01
Information Content per bp:1.860
Number of Target Sequences with motif806.0
Percentage of Target Sequences with motif19.54%
Number of Background Sequences with motif2965.4
Percentage of Background Sequences with motif13.71%
Average Position of motif in Targets428.6 +/- 357.8bp
Average Position of motif in Background275.1 +/- 197.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MSN2(MacIsaac)/Yeast

Match Rank:1
Score:0.92
Offset:1
Orientation:forward strand
Alignment:MAAGGGGC
-AAGGGGC

MSN4(MacIsaac)/Yeast

Match Rank:2
Score:0.86
Offset:1
Orientation:forward strand
Alignment:MAAGGGGC
-AAGGGGG

MSN4/Literature(Harbison)/Yeast

Match Rank:3
Score:0.85
Offset:1
Orientation:forward strand
Alignment:MAAGGGGC
-AAGGGGN

RGM1/MA0366.1/Jaspar

Match Rank:4
Score:0.84
Offset:2
Orientation:forward strand
Alignment:MAAGGGGC
--AGGGG-

MSN2/MSN2_H2O2Hi/1-MSN2(Harbison)/Yeast

Match Rank:5
Score:0.82
Offset:1
Orientation:forward strand
Alignment:MAAGGGGC--
-AAGGGGCGG

MSN4/MA0342.1/Jaspar

Match Rank:6
Score:0.81
Offset:2
Orientation:forward strand
Alignment:MAAGGGGC
--AGGGG-

MSN2/MA0341.1/Jaspar

Match Rank:7
Score:0.78
Offset:2
Orientation:forward strand
Alignment:MAAGGGGC
--AGGGG-

YER130C/MA0423.1/Jaspar

Match Rank:8
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-MAAGGGGC
NATAGGGGN

GIS1/MA0306.1/Jaspar

Match Rank:9
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-MAAGGGGC
NTTAGGGGT

REI1/MA0364.1/Jaspar

Match Rank:10
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:MAAGGGGC
TCAGGGG-