Information for 10-GGGTKCGA (Motif 7)


Reverse Opposite:

p-value:1e-35
log p-value:-8.246e+01
Information Content per bp:1.777
Number of Target Sequences with motif698.0
Percentage of Target Sequences with motif16.36%
Number of Background Sequences with motif2126.3
Percentage of Background Sequences with motif10.10%
Average Position of motif in Targets382.1 +/- 317.4bp
Average Position of motif in Background282.5 +/- 203.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

OPI1/Literature(Harbison)/Yeast

Match Rank:1
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:GGGTKCGA
-GATTCGA

AFT2/AFT2_H2O2Lo/10-RCS1[~AFT2](Harbison)/Yeast

Match Rank:2
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GGGTKCGA
GGGTGC--

AFT2(MacIsaac)/Yeast

Match Rank:3
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GGGTKCGA
GGGTGCA-

RCS1(MacIsaac)/Yeast

Match Rank:4
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GGGTKCGA
GGGTGCA-

RCS1/RCS1_H2O2Hi/35-RCS1(Harbison)/Yeast

Match Rank:5
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GGGTKCGA-
GGGTGCANT

OPI1(MacIsaac)/Yeast

Match Rank:6
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GGGTKCGA
CGGTTCG-

OPI1/MA0349.1/Jaspar

Match Rank:7
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GGGTKCGA
CGGTTCG-

STB4/STB4_YPD/[](Harbison)/Yeast

Match Rank:8
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GGGTKCGA
TCGGNNCGA

STB4(MacIsaac)/Yeast

Match Rank:9
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GGGTKCGA
TCGGNNCGA

byn/dmmpmm(Bigfoot)/fly

Match Rank:10
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GGGTKCGA
ANGTGCGA