Information for 8-GGSCGGGS (Motif 6)


Reverse Opposite:

p-value:1e-38
log p-value:-8.882e+01
Information Content per bp:1.567
Number of Target Sequences with motif975.0
Percentage of Target Sequences with motif22.85%
Number of Background Sequences with motif3207.0
Percentage of Background Sequences with motif15.23%
Average Position of motif in Targets480.2 +/- 345.5bp
Average Position of motif in Background274.1 +/- 237.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.36
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SP2/MA0516.1/Jaspar

Match Rank:1
Score:0.76
Offset:-6
Orientation:reverse strand
Alignment:------GGSCGGGS-
GGGNGGGGGCGGGGC

NHP10/MA0344.1/Jaspar

Match Rank:2
Score:0.76
Offset:1
Orientation:forward strand
Alignment:GGSCGGGS-
-GCCGGGGA

Sp1(Zf)/Promoter/Homer

Match Rank:3
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--GGSCGGGS--
GGGGGCGGGGCC

SKN7/SKN7_H2O2Lo/[](Harbison)/Yeast

Match Rank:4
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:GGSCGGGS-
GGCCCNGGC

SP1/MA0079.3/Jaspar

Match Rank:5
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--GGSCGGGS-
GGGGGCGGGGC

PB0039.1_Klf7_1/Jaspar

Match Rank:6
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----GGSCGGGS----
NNAGGGGCGGGGTNNA

SKN7(MacIsaac)/Yeast

Match Rank:7
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:GGSCGGGS
GGCCCGGA

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---GGSCGGGS---
AGGGGGCGGGGCTG

btd/MA0443.1/Jaspar

Match Rank:9
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---GGSCGGGS
AGGGGGCGGA-

KLF5/MA0599.1/Jaspar

Match Rank:10
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GGSCGGGS-
GGGGNGGGGC