Information for 2-CGCGCGGC (Motif 2)


Reverse Opposite:

p-value:1e-91
log p-value:-2.102e+02
Information Content per bp:1.559
Number of Target Sequences with motif1095.0
Percentage of Target Sequences with motif25.66%
Number of Background Sequences with motif2922.7
Percentage of Background Sequences with motif13.88%
Average Position of motif in Targets435.5 +/- 321.9bp
Average Position of motif in Background282.5 +/- 243.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.46
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RSC3/MA0374.1/Jaspar

Match Rank:1
Score:0.92
Offset:0
Orientation:forward strand
Alignment:CGCGCGGC
CGCGCGG-

RSC30/MA0375.1/Jaspar

Match Rank:2
Score:0.87
Offset:-2
Orientation:forward strand
Alignment:--CGCGCGGC
CGCGCGCG--

Tcfl5/MA0632.1/Jaspar

Match Rank:3
Score:0.86
Offset:-2
Orientation:forward strand
Alignment:--CGCGCGGC
GGCACGTGCC

MBP1/MA0329.1/Jaspar

Match Rank:4
Score:0.84
Offset:-2
Orientation:reverse strand
Alignment:--CGCGCGGC
NNCGCGT---

SUT1(MacIsaac)/Yeast

Match Rank:5
Score:0.82
Offset:0
Orientation:forward strand
Alignment:CGCGCGGC
CGCGGGG-

SUT1/MA0399.1/Jaspar

Match Rank:6
Score:0.82
Offset:0
Orientation:forward strand
Alignment:CGCGCGGC
CGCGGGG-

Hes1/MA1099.1/Jaspar

Match Rank:7
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--CGCGCGGC
NNCGCGTGNN

DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer

Match Rank:8
Score:0.79
Offset:-3
Orientation:forward strand
Alignment:---CGCGCGGC
TAGCGCGC---

h/dmmpmm(Bergman)/fly

Match Rank:9
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----CGCGCGGC--
NTGGCGCGTGCCNN

h/MA0449.1/Jaspar

Match Rank:10
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--CGCGCGGC
GGCACGTGCC