Information for 13-TMCGTRCA (Motif 10)


Reverse Opposite:

p-value:1e-23
log p-value:-5.359e+01
Information Content per bp:1.679
Number of Target Sequences with motif412.0
Percentage of Target Sequences with motif9.66%
Number of Background Sequences with motif1210.9
Percentage of Background Sequences with motif5.75%
Average Position of motif in Targets441.4 +/- 361.0bp
Average Position of motif in Background295.3 +/- 190.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

FHL1(MacIsaac)/Yeast

Match Rank:1
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-TMCGTRCA-
ATCCGTACAT

SPL14(SBP)/Arabidopsis thaliana/AthaMap

Match Rank:2
Score:0.76
Offset:-5
Orientation:forward strand
Alignment:-----TMCGTRCA------
TCGCGTCCGTACAGGAGGG

SPL14/MA0586.1/Jaspar

Match Rank:3
Score:0.76
Offset:-5
Orientation:forward strand
Alignment:-----TMCGTRCA------
TCGCGTCCGTACAGGAGGG

SPL11/MA1056.1/Jaspar

Match Rank:4
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-TMCGTRCA---
NTCCGTACGNNN

SPL5/MA1059.1/Jaspar

Match Rank:5
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:TMCGTRCA-
NCCGTACNN

SPL12/MA1057.1/Jaspar

Match Rank:6
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:TMCGTRCA
NCCGTACN

SPL4/MA1058.1/Jaspar

Match Rank:7
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TMCGTRCA
NNCCGTACN

FHL1/FHL1_YPD/47-RAP1(Harbison)/Yeast

Match Rank:8
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TMCGTRCA-
CACCCGTACAT

SFP1/SFP1_SM/50-RAP1(Harbison)/Yeast

Match Rank:9
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TMCGTRCA-
ACCCGTACAT

SFP1(MacIsaac)/Yeast

Match Rank:10
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TMCGTRCA-
ACCCGTACAT