Information for 12-CCGCGGAG (Motif 9)


Reverse Opposite:

p-value:1e-25
log p-value:-5.814e+01
Information Content per bp:1.622
Number of Target Sequences with motif1026.0
Percentage of Target Sequences with motif24.20%
Number of Background Sequences with motif3629.5
Percentage of Background Sequences with motif17.79%
Average Position of motif in Targets468.1 +/- 363.8bp
Average Position of motif in Background288.5 +/- 233.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

IME1/MA0320.1/Jaspar

Match Rank:1
Score:0.88
Offset:0
Orientation:forward strand
Alignment:CCGCGGAG
CCGCCGAG

IME1(MacIsaac)/Yeast

Match Rank:2
Score:0.87
Offset:0
Orientation:forward strand
Alignment:CCGCGGAG
CCGCCGAG

PDR1/MA0352.1/Jaspar

Match Rank:3
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-CCGCGGAG
TCCGCGGA-

PDR3/MA0353.1/Jaspar

Match Rank:4
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-CCGCGGAG
TCCGCGGA-

PDR3/Literature(Harbison)/Yeast

Match Rank:5
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-CCGCGGAG
TCCGCGGA-

PDR3(MacIsaac)/Yeast

Match Rank:6
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-CCGCGGAG
TCCGCGGA-

SUT1/MA0399.1/Jaspar

Match Rank:7
Score:0.73
Offset:1
Orientation:forward strand
Alignment:CCGCGGAG
-CGCGGGG

SUT1(MacIsaac)/Yeast

Match Rank:8
Score:0.73
Offset:1
Orientation:forward strand
Alignment:CCGCGGAG
-CGCGGGG

HAL9/MA0311.1/Jaspar

Match Rank:9
Score:0.71
Offset:3
Orientation:forward strand
Alignment:CCGCGGAG
---CGGAA

CHA4/MA0283.1/Jaspar

Match Rank:10
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CCGCGGAG-
-GGCGGAGA