Information for 9-BGTAYATA (Motif 7)


Reverse Opposite:

p-value:1e-32
log p-value:-7.453e+01
Information Content per bp:1.596
Number of Target Sequences with motif1933.0
Percentage of Target Sequences with motif45.60%
Number of Background Sequences with motif7477.6
Percentage of Background Sequences with motif36.64%
Average Position of motif in Targets409.7 +/- 375.3bp
Average Position of motif in Background284.7 +/- 206.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MOT2/MA0379.1/Jaspar

Match Rank:1
Score:0.85
Offset:3
Orientation:forward strand
Alignment:BGTAYATA
---ATATA

YAP6(MacIsaac)/Yeast

Match Rank:2
Score:0.82
Offset:1
Orientation:forward strand
Alignment:BGTAYATA-
-TTACATAA

TATA-box/SacCer-Promoters/Homer

Match Rank:3
Score:0.81
Offset:2
Orientation:reverse strand
Alignment:BGTAYATA----
--TATATAWDVV

Cf2/dmmpmm(Bergman)/fly

Match Rank:4
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:BGTAYATA-
TATATATAC

Cf2/MA0015.1/Jaspar

Match Rank:5
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:BGTAYATA---
-NTATATATAC

PB0163.1_Six6_2/Jaspar

Match Rank:6
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--BGTAYATA-------
ATGGGATATATCCGCCT

NHP6A/MA0345.1/Jaspar

Match Rank:7
Score:0.75
Offset:-5
Orientation:reverse strand
Alignment:-----BGTAYATA--------
NNATNNTTATATATAGNNNAN

NFIL3/MA0025.1/Jaspar

Match Rank:8
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--BGTAYATA-
ANGTTACATAA

bin/dmmpmm(Bergman)/fly

Match Rank:9
Score:0.74
Offset:1
Orientation:forward strand
Alignment:BGTAYATA
-ATAAATA

SPT15/MA0386.1/Jaspar

Match Rank:10
Score:0.73
Offset:-4
Orientation:reverse strand
Alignment:----BGTAYATA---------
NNNNAATATATATANCTANNN