Information for 4-CGCVCCGC (Motif 4)


Reverse Opposite:

p-value:1e-72
log p-value:-1.663e+02
Information Content per bp:1.546
Number of Target Sequences with motif1612.0
Percentage of Target Sequences with motif38.03%
Number of Background Sequences with motif5188.1
Percentage of Background Sequences with motif25.42%
Average Position of motif in Targets479.0 +/- 400.8bp
Average Position of motif in Background281.3 +/- 250.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.56
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RAP2-10/MA0980.1/Jaspar

Match Rank:1
Score:0.76
Offset:1
Orientation:forward strand
Alignment:CGCVCCGC-
-GCGCCGCC

PHO2/PHO2_H2O2Hi/[](Harbison)/Yeast

Match Rank:2
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:CGCVCCGC---
CGCACCGCACG

ERF109/MA1053.1/Jaspar

Match Rank:3
Score:0.75
Offset:1
Orientation:forward strand
Alignment:CGCVCCGC-
-GCGCCGCC

RAP2-6/MA1052.1/Jaspar

Match Rank:4
Score:0.73
Offset:1
Orientation:forward strand
Alignment:CGCVCCGC-
-GCGCCGCC

RAP2-3/MA1051.1/Jaspar

Match Rank:5
Score:0.73
Offset:1
Orientation:forward strand
Alignment:CGCVCCGC-
-GCGCCGCC

STP1(MacIsaac)/Yeast

Match Rank:6
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:CGCVCCGC-
-GCGCCGCA

CRF4/MA0976.1/Jaspar

Match Rank:7
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CGCVCCGC-
-GCGCCGCC

STP1/MA0394.1/Jaspar

Match Rank:8
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CGCVCCGC-
-GCGCCGCA

CRF2/MA0975.1/Jaspar

Match Rank:9
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CGCVCCGC-
-CCGCCGCC

RSC3/MA0374.1/Jaspar

Match Rank:10
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CGCVCCGC
CGCGCGG-