Information for 24-ATAAGAAA (Motif 19)


Reverse Opposite:

p-value:1e-10
log p-value:-2.369e+01
Information Content per bp:1.863
Number of Target Sequences with motif1837.0
Percentage of Target Sequences with motif43.34%
Number of Background Sequences with motif7849.3
Percentage of Background Sequences with motif38.46%
Average Position of motif in Targets416.6 +/- 342.3bp
Average Position of motif in Background286.1 +/- 195.7bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.59
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PEND/MA0127.1/Jaspar

Match Rank:1
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-ATAAGAAA-
AATAAGAAGT

PB0148.1_Mtf1_2/Jaspar

Match Rank:2
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--ATAAGAAA----
AAATAAGAAAAAAC

GLN3/GLN3_RAPA/8-GZF3,11-GLN3(Harbison)/Yeast

Match Rank:3
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-ATAAGAAA
GATAAGATA

hb/dmmpmm(Bergman)/fly

Match Rank:4
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--ATAAGAAA
CAATAAAAAA

AZF1/MA0277.1/Jaspar

Match Rank:5
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-ATAAGAAA
AAAAAGAAA

vvl/dmmpmm(SeSiMCMC)/fly

Match Rank:6
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:ATAAGAAA
TTAAGCA-

DAL82/DAL82_SM/3-DAL82(Harbison)/Yeast

Match Rank:7
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-ATAAGAAA
GATAAGA--

NAC083/MA1043.1/Jaspar

Match Rank:8
Score:0.70
Offset:0
Orientation:forward strand
Alignment:ATAAGAAA--
ATACGCAACC

GZF3/Literature(Harbison)/Yeast

Match Rank:9
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-ATAAGAAA
GATAAG---

GZF3(MacIsaac)/Yeast

Match Rank:10
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-ATAAGAAA
GATAAG---