Information for 23-VGCCYTAA (Motif 18)


Reverse Opposite:

p-value:1e-14
log p-value:-3.346e+01
Information Content per bp:1.749
Number of Target Sequences with motif181.0
Percentage of Target Sequences with motif4.27%
Number of Background Sequences with motif462.2
Percentage of Background Sequences with motif2.27%
Average Position of motif in Targets336.3 +/- 270.9bp
Average Position of motif in Background276.3 +/- 199.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TRB2/MA1073.1/Jaspar

Match Rank:1
Score:0.78
Offset:0
Orientation:forward strand
Alignment:VGCCYTAA
TGCCCTAA

TBF1/MA0403.1/Jaspar

Match Rank:2
Score:0.77
Offset:0
Orientation:forward strand
Alignment:VGCCYTAA
AACCCTAA

RPH1/MA0372.1/Jaspar

Match Rank:3
Score:0.75
Offset:0
Orientation:forward strand
Alignment:VGCCYTAA
ACCCCTAA

P0510F09.23/MA1030.1/Jaspar

Match Rank:4
Score:0.71
Offset:0
Orientation:forward strand
Alignment:VGCCYTAA--
AACCCTAGAT

GIS1/MA0306.1/Jaspar

Match Rank:5
Score:0.70
Offset:0
Orientation:forward strand
Alignment:VGCCYTAA-
ACCCCTAAA

RPH1/Literature(Harbison)/Yeast

Match Rank:6
Score:0.69
Offset:0
Orientation:forward strand
Alignment:VGCCYTAA--
CCCCTTAAGG

RPH1(MacIsaac)/Yeast

Match Rank:7
Score:0.69
Offset:0
Orientation:forward strand
Alignment:VGCCYTAA--
CCCCTTAAGG

caudal(Homeobox)/Drosophila-Embryos-ChIP-Chip(modEncode)/Homer

Match Rank:8
Score:0.69
Offset:0
Orientation:forward strand
Alignment:VGCCYTAA--
GGYCATAAAW

cad/dmmpmm(SeSiMCMC)/fly

Match Rank:9
Score:0.68
Offset:2
Orientation:forward strand
Alignment:VGCCYTAA-
--GCATAAA

Tup/dmmpmm(Noyes_hd)/fly

Match Rank:10
Score:0.67
Offset:2
Orientation:forward strand
Alignment:VGCCYTAA----
--CCTTAATTGA