Information for 22-TTTKCCAC (Motif 17)


Reverse Opposite:

p-value:1e-14
log p-value:-3.369e+01
Information Content per bp:1.858
Number of Target Sequences with motif218.0
Percentage of Target Sequences with motif5.14%
Number of Background Sequences with motif592.8
Percentage of Background Sequences with motif2.90%
Average Position of motif in Targets450.9 +/- 341.9bp
Average Position of motif in Background289.0 +/- 202.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RPN4/RPN4_H2O2Lo/[](Harbison)/Yeast

Match Rank:1
Score:0.89
Offset:0
Orientation:forward strand
Alignment:TTTKCCAC-
TTTGCCACC

RPN4(MacIsaac)/Yeast

Match Rank:2
Score:0.87
Offset:-1
Orientation:reverse strand
Alignment:-TTTKCCAC--
TTTTGCCACCG

NFATC2/MA0152.1/Jaspar

Match Rank:3
Score:0.80
Offset:0
Orientation:forward strand
Alignment:TTTKCCAC
TTTTCCA-

NFAT5/MA0606.1/Jaspar

Match Rank:4
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-TTTKCCAC-
ATTTTCCATT

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:5
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-TTTKCCAC-
ATTTTCCATT

MET32/MA0334.1/Jaspar

Match Rank:6
Score:0.71
Offset:2
Orientation:forward strand
Alignment:TTTKCCAC-
--CGCCACA

NFATC3/MA0625.1/Jaspar

Match Rank:7
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TTTKCCAC-
ATTTTCCATT

Su(H)/dmmpmm(Papatsenko)/fly

Match Rank:8
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TTTKCCAC-
GTTCCCACG

Su(H)/MA0085.1/Jaspar

Match Rank:9
Score:0.70
Offset:-6
Orientation:reverse strand
Alignment:------TTTKCCAC--
ATCTCGGTTCCCACAN

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TTTKCCAC-
HTTTCCCASG