Information for 21-YCCCTTTC (Motif 16)


Reverse Opposite:

p-value:1e-16
log p-value:-3.732e+01
Information Content per bp:1.745
Number of Target Sequences with motif946.0
Percentage of Target Sequences with motif22.32%
Number of Background Sequences with motif3536.4
Percentage of Background Sequences with motif17.33%
Average Position of motif in Targets430.2 +/- 351.4bp
Average Position of motif in Background284.9 +/- 213.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.24
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MSN4(MacIsaac)/Yeast

Match Rank:1
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-YCCCTTTC
CCCCCTT--

YER130C/MA0423.1/Jaspar

Match Rank:2
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-YCCCTTTC
ACCCCTATT

RGM1/MA0366.1/Jaspar

Match Rank:3
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:YCCCTTTC
CCCCT---

MSN4/Literature(Harbison)/Yeast

Match Rank:4
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-YCCCTTTC
NCCCCTG--

Kr/dmmpmm(Noyes)/fly

Match Rank:5
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--YCCCTTTC-
TAACCCTTTNG

MSN2(MacIsaac)/Yeast

Match Rank:6
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-YCCCTTTC
GCCCCTT--

MSN4/MA0342.1/Jaspar

Match Rank:7
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:YCCCTTTC
CCCCT---

MSN2/MA0341.1/Jaspar

Match Rank:8
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:YCCCTTTC
CCCCT---

Kr/MA0452.2/Jaspar

Match Rank:9
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----YCCCTTTC--
TTTAACCCTTTTTC

GIS1/MA0306.1/Jaspar

Match Rank:10
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-YCCCTTTC
ACCCCTAAA