Information for 20-AGCGCGCA (Motif 15)


Reverse Opposite:

p-value:1e-16
log p-value:-3.809e+01
Information Content per bp:1.789
Number of Target Sequences with motif256.0
Percentage of Target Sequences with motif6.04%
Number of Background Sequences with motif703.5
Percentage of Background Sequences with motif3.45%
Average Position of motif in Targets501.0 +/- 426.6bp
Average Position of motif in Background287.9 +/- 240.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer

Match Rank:1
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-AGCGCGCA
TAGCGCGC-

TEA1/MA0405.1/Jaspar

Match Rank:2
Score:0.72
Offset:1
Orientation:forward strand
Alignment:AGCGCGCA-
-GCGGACAT

PB0095.1_Zfp161_1/Jaspar

Match Rank:3
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---AGCGCGCA-----
TGGCGCGCGCGCCTGA

PB0008.1_E2F2_1/Jaspar

Match Rank:4
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----AGCGCGCA--
ATAAAGGCGCGCGAT

DAL82/MA0291.1/Jaspar

Match Rank:5
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:AGCGCGCA----
---GCGCACATT

TCP23/MA1066.1/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AGCGCGCA-
-GGGCCCAC

PB0009.1_E2F3_1/Jaspar

Match Rank:7
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----AGCGCGCA--
ATAAGGGCGCGCGAT

OsI_08196/MA1050.1/Jaspar

Match Rank:8
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AGCGCGCA-
-GGGCCCAC

TCP15/MA1062.1/Jaspar

Match Rank:9
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AGCGCGCA-
-GGGCCCAC

POL006.1_BREu/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AGCGCGCA
AGCGCGCC