Information for 17-GTTTCGTG (Motif 13)


Reverse Opposite:

p-value:1e-17
log p-value:-4.112e+01
Information Content per bp:1.530
Number of Target Sequences with motif118.0
Percentage of Target Sequences with motif2.78%
Number of Background Sequences with motif226.6
Percentage of Background Sequences with motif1.11%
Average Position of motif in Targets456.6 +/- 358.9bp
Average Position of motif in Background267.1 +/- 204.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SWI4(MacIsaac)/Yeast

Match Rank:1
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:GTTTCGTG-
TTTTCGCGT

NAC025/MA0935.1/Jaspar

Match Rank:2
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:GTTTCGTG
GTTACGTA

SWI4/MA0401.1/Jaspar

Match Rank:3
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:GTTTCGTG-
-TTTCGCGT

NAC058/MA0938.1/Jaspar

Match Rank:4
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:GTTTCGTG-
-TTGCGTGN

Deaf1/dmmpmm(Pollard)/fly

Match Rank:5
Score:0.75
Offset:2
Orientation:forward strand
Alignment:GTTTCGTG
--TTCGGG

Deaf1/MA0185.1/Jaspar

Match Rank:6
Score:0.75
Offset:2
Orientation:forward strand
Alignment:GTTTCGTG
--TTCGGG

NAC083/MA1043.1/Jaspar

Match Rank:7
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-GTTTCGTG-
NGTTGCGTAT

T11I18.17/MA0936.1/Jaspar

Match Rank:8
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:GTTTCGTG-
-TTGCGTGT

SWI4/SWI4_YPD/29-SWI4,29-SWI6(Harbison)/Yeast

Match Rank:9
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:GTTTCGTG--
-TTTCGCGTC

NAC055/MA0937.1/Jaspar

Match Rank:10
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:GTTTCGTG-
-TTACGTGT