Information for 15-GAAAAATT (Motif 11)


Reverse Opposite:

p-value:1e-21
log p-value:-5.026e+01
Information Content per bp:1.948
Number of Target Sequences with motif657.0
Percentage of Target Sequences with motif15.50%
Number of Background Sequences with motif2168.2
Percentage of Background Sequences with motif10.62%
Average Position of motif in Targets338.4 +/- 283.8bp
Average Position of motif in Background286.4 +/- 184.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

cad/dmmpmm(Down)/fly

Match Rank:1
Score:0.86
Offset:1
Orientation:forward strand
Alignment:GAAAAATT-
-AAAAATTT

SFP1/SacCer-Promoters/Homer

Match Rank:2
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:GAAAAATT----
RAAAATTTTTHH

STB3/MA0390.1/Jaspar

Match Rank:3
Score:0.81
Offset:-7
Orientation:reverse strand
Alignment:-------GAAAAATT------
NNNNAGTGAAAAATTTTNGAC

SUM1/MA0398.1/Jaspar

Match Rank:4
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:GAAAAATT--
-AAAAATTTT

SFP1/MA0378.1/Jaspar

Match Rank:5
Score:0.78
Offset:-5
Orientation:reverse strand
Alignment:-----GAAAAATT--------
CNGNAGAAAATTTTTTNNNNT

EDS1/MA0294.1/Jaspar

Match Rank:6
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--GAAAAATT
CGGAAAAAT-

NFATC2/MA0152.1/Jaspar

Match Rank:7
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GAAAAATT
TGGAAAA---

dl/dmmpmm(SeSiMCMC)/fly

Match Rank:8
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GAAAAATT-
GGAAAATCC

dl/dmmpmm(Bigfoot)/fly

Match Rank:9
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GAAAAATT-
GGGGAAAATCC

abd-A/dmmpmm(SeSiMCMC)/fly

Match Rank:10
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GAAAAATT
-ATTAATT