Information for 14-CCACTCGG (Motif 10)


Reverse Opposite:

p-value:1e-21
log p-value:-5.059e+01
Information Content per bp:1.958
Number of Target Sequences with motif119.0
Percentage of Target Sequences with motif2.81%
Number of Background Sequences with motif202.5
Percentage of Background Sequences with motif0.99%
Average Position of motif in Targets351.5 +/- 294.4bp
Average Position of motif in Background277.9 +/- 250.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0114.1_Egr1_2/Jaspar

Match Rank:1
Score:0.73
Offset:-6
Orientation:reverse strand
Alignment:------CCACTCGG--
NNAGTCCCACTCNNNN

z/dmmpmm(Down)/fly

Match Rank:2
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:CCACTCGG
-CACTCA-

BHLH112/MA0961.1/Jaspar

Match Rank:3
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-CCACTCGG
GCCACTTGC

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:4
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CCACTCGG
MRSCACTYAA

tin/MA0247.2/Jaspar

Match Rank:5
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CCACTCGG--
CCACTTGANA

z/dmmpmm(Bigfoot)/fly

Match Rank:6
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CCACTCGG
-CACTCA-

RDS2/MA0362.1/Jaspar

Match Rank:7
Score:0.67
Offset:3
Orientation:forward strand
Alignment:CCACTCGG--
---CTCGGGG

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:8
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CCACTCGG-
NSCACTYVAV

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CCACTCGG
AASCACTCAA

NFY(CCAAT)/Promoter/Homer

Match Rank:10
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CCACTCGG
AGCCAATCGG