Information for 9-TGCACGGA (Motif 7)


Reverse Opposite:

p-value:1e-43
log p-value:-1.011e+02
Information Content per bp:1.840
Number of Target Sequences with motif735.0
Percentage of Target Sequences with motif16.82%
Number of Background Sequences with motif2087.8
Percentage of Background Sequences with motif9.94%
Average Position of motif in Targets427.8 +/- 310.0bp
Average Position of motif in Background279.8 +/- 200.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

FHL1(MacIsaac)/Yeast

Match Rank:1
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-TGCACGGA-
ATGTACGGAT

SPL14(SBP)/Arabidopsis thaliana/AthaMap

Match Rank:2
Score:0.77
Offset:-6
Orientation:reverse strand
Alignment:------TGCACGGA-----
CCCTNCTGTACGGACGNNA

SPL14/MA0586.1/Jaspar

Match Rank:3
Score:0.77
Offset:-6
Orientation:reverse strand
Alignment:------TGCACGGA-----
CCCTNCTGTACGGACGNNA

FHL1/FHL1_YPD/47-RAP1(Harbison)/Yeast

Match Rank:4
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TGCACGGA--
ATGTACGGGTG

YKL222C/MA0428.1/Jaspar

Match Rank:5
Score:0.71
Offset:2
Orientation:forward strand
Alignment:TGCACGGA---
--AACGGAAAT

PDR3/MA0353.1/Jaspar

Match Rank:6
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TGCACGGA
TCCGCGGA

PDR3/Literature(Harbison)/Yeast

Match Rank:7
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TGCACGGA
TCCGCGGA

PDR3(MacIsaac)/Yeast

Match Rank:8
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TGCACGGA
TCCGCGGA

SFP1/SFP1_SM/50-RAP1(Harbison)/Yeast

Match Rank:9
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TGCACGGA-
ATGTACGGGT

SFP1(MacIsaac)/Yeast

Match Rank:10
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TGCACGGA-
ATGTACGGGT