Information for 7-CCGAGCGG (Motif 5)


Reverse Opposite:

p-value:1e-46
log p-value:-1.062e+02
Information Content per bp:1.603
Number of Target Sequences with motif789.0
Percentage of Target Sequences with motif18.05%
Number of Background Sequences with motif2260.2
Percentage of Background Sequences with motif10.76%
Average Position of motif in Targets418.3 +/- 319.2bp
Average Position of motif in Background277.3 +/- 217.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.28
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----CCGAGCGG
GAGSCCGAGC--

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CCGAGCGG
CGGAGC--

ARO80/MA0273.1/Jaspar

Match Rank:3
Score:0.66
Offset:-9
Orientation:reverse strand
Alignment:---------CCGAGCGG----
NNNNANTTNCCGAGANNTNNC

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CCGAGCGG
--CAGCC-

CEP3/MA0282.1/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CCGAGCGG
TTTCCGAG---

RDS2/MA0362.1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CCGAGCGG
CCCCGAN---

IME1(MacIsaac)/Yeast

Match Rank:7
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CCGAGCGG
CCGCCGAG---

z/dmmpmm(Down)/fly

Match Rank:8
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CCGAGCGG
-TGAGTG-

z/dmmpmm(Bigfoot)/fly

Match Rank:9
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CCGAGCGG
-TGAGTG-

STB4/MA0391.1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CCGAGCGG
TTCCGAG---