Information for 2-CGCGYCGC (Motif 2)


Reverse Opposite:

p-value:1e-83
log p-value:-1.921e+02
Information Content per bp:1.582
Number of Target Sequences with motif1374.0
Percentage of Target Sequences with motif31.43%
Number of Background Sequences with motif4013.4
Percentage of Background Sequences with motif19.11%
Average Position of motif in Targets410.1 +/- 305.8bp
Average Position of motif in Background276.8 +/- 238.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.56
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RSC3/MA0374.1/Jaspar

Match Rank:1
Score:0.94
Offset:0
Orientation:forward strand
Alignment:CGCGYCGC
CGCGCGG-

MBP1/MA0329.1/Jaspar

Match Rank:2
Score:0.87
Offset:-2
Orientation:reverse strand
Alignment:--CGCGYCGC
NNCGCGT---

RSC30/MA0375.1/Jaspar

Match Rank:3
Score:0.84
Offset:-2
Orientation:forward strand
Alignment:--CGCGYCGC
CGCGCGCG--

SWI6(MacIsaac)/Yeast

Match Rank:4
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:CGCGYCGC
CGCGTC--

DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer

Match Rank:5
Score:0.81
Offset:-3
Orientation:forward strand
Alignment:---CGCGYCGC
TAGCGCGC---

MBP1(MacIsaac)/Yeast

Match Rank:6
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-CGCGYCGC
ACGCGTC--

MBP1/MBP1_H2O2Hi/[](Harbison)/Yeast

Match Rank:7
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-CGCGYCGC
ACGCGTC--

SUT1(MacIsaac)/Yeast

Match Rank:8
Score:0.79
Offset:0
Orientation:forward strand
Alignment:CGCGYCGC
CGCGGGG-

SUT1/MA0399.1/Jaspar

Match Rank:9
Score:0.79
Offset:0
Orientation:forward strand
Alignment:CGCGYCGC
CGCGGGG-

MBP1::SWI6/MA0330.1/Jaspar

Match Rank:10
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-CGCGYCGC
ACGCGTT--